H. Grubmueller: search on Z-Library

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1

A Versatile Lambda-Dynamics Module for GROMACS

Ullmann, R. Thomas, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

Language:

english

File:

PDF, 46 KB

english, 2020

2

Developing a camp performance indicator system and its application to Zaatari, Jordan

Schön, Anna-Mara, Al-Saadi, Shahad, Grubmueller, Jakob, Schumann-Bölsche, Dorit

Journal:

Journal of Humanitarian Logistics and Supply Chain Management

Year:

2018

Language:

english

File:

PDF, 358 KB

english, 2018

3

Subnanometer Mechanics of Microtubule Self-(Dis)Assembly

Igaev, Maxim, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 42 KB

2020

4

Charting the Hydrophobic Effect: Computing Spatially Resolved Absolute Hydration Shell Entropies

Heinz, Leonard P., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 43 KB

english, 2019

5

ChemInform Abstract: HYDROGENOLYSIS OF ALKYL-SUBSTITUTED ADAMANTANES, DIAMANTANES, AND TRIAMANTANES IN THE GAS PHASE ON A NICKEL-ALUMINA CATALYST

GRUBMUELLER, P., MAIER, W. F., SCHLEYER, P. VON R.

Journal:

Chemischer Informationsdienst

Year:

1980

File:

PDF, 111 KB

1980

6

Mechanisms of Sequence Dependent Translational Stalling

Bock, Lars V., Huter, Paul PH, Arenz, Stefan, Graf, Michael, Grubmueller, Helmut, Wilson, Daniel, Vaiana, Andrea C.

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 39 KB

english, 2017

7

ChemInform Abstract: AN ADAMANTANE REARRANGEMENT. A NEW PATH

SCHLEYER, P. VON R., GRUBMUELLER, P., MAIER, W. F., VOSTROWSKY, O.

Journal:

Chemischer Informationsdienst

Year:

1980

File:

PDF, 200 KB

1980

8

Determining Free Energy Differences through Variational Morphing

Reinhardt, Martin, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 38 KB

2020

9

Spatial Distribution of Elasticity in the F1 Motor of ATP Synthase Reveals the Microscopic Nature of the Coupling Between the Central Shaft and the Catalytic Subunit

Czub, Jacek, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 45 KB

english, 2010

10

Linear-Scaling Soft Core Scheme for Alchemical Free Energy Calculations

Buelens, Floris P., Seeliger, Daniel, de Groot, Bert L., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 33 KB

english, 2011

11

Asymmetric ATP Hydrolysis Kinetics of ABCE1 Explained with a Markov State Model

SchÃ¤ffner, Malte, Leioatts, Nicholas, Smith, Colin A., Leonov, Hadas, de Groot, Bert L., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 42 KB

2020

12

A Scaling Relation Between Accessible Phase Space Volume and Escape Rates for Random Walks in High-Dimensional Hierarchical Energy Landscapes - Implications for Protein Dynamics

Volkhardt, Andreas, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 42 KB

2020

13

Constant pH Simulations In Explicit Solvent Using The Lambda-Dynamics Approach

Donnini, Serena, Tegeler, Florian, Groenhof, Gerrit, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 73 KB

english, 2009

14

Free Energy Landscapes of Vesicle Fusion by Umbrella Sampling MD Simulations

Bubnis, Gregory, Risselada, H.J., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 33 KB

english, 2013

15

Determining Free Energy Differences Through Non-Linear Morphing

Reinhardt, Martin, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2019

File:

PDF, 43 KB

2019

16

ChemInform Abstract: CATALYTIC HYDROGENOLYSIS. 2. DIRECT CLEAVAGE OF FUNCTIONAL GROUPS BY CATALYTIC HYDROGENOLYSIS

MAIER, W. F., GRUBMUELLER, P., THIES, I., STEIN, P. M., MCKERVEY, M. A., SCHLEYER, P. VON R.

Journal:

Chemischer Informationsdienst

Year:

1980

File:

PDF, 162 KB

1980

17

Thermodynamic Control of Ribosomal Frameshifting

Bock, Lars V., Caliskan, Neva, Korniy, Natalia, Peske, Frank, Rodnina, Marina V., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2019

File:

PDF, 46 KB

2019

18

Simulations of the Bacterial Ribosomal Decoding Switch

Vaiana, Andrea C., Grubmueller, Helmut, Sanbonmatsu, Kevin Y.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 37 KB

english, 2010

19

Bayesian Structure Determination from Sparse Single Molecule X-Ray Diffraction Images

Walczak, Michal, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 85 KB

english, 2014

20

Structural Determinants of Lipid Membrane Thickening at Close Distances

Heinz, Leonard P., Witkowska, Agata, Grubmueller, Helmut, Jahn, Reinhard

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 46 KB

2020

21

Microscopic Picture of the Mechanism of Energy Transmission in F1-ATPase as Revealed by Molecular Dynamics Simulations

Czub, Jacek, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 33 KB

english, 2011

22

Conformational Dynamics and Functional Asymmetry of ABCE1, a Ribosome Recycling Protein

Leonov, Hadas, de Groot, Bert L., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 37 KB

english, 2015

23

Long-Range Mechanical Coupling in the Microtubule Lattice

Igaev, Maxim, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 42 KB

english, 2019

24

Quantitative Membrane Bending Energies at Extreme Curvatures from Molecular Dynamics Simulations

Bubnis, Gregory, Risselada, H. Jelger, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 105 KB

english, 2012

25

Estimating the High Dimensional Ruggedness of Protein Free Energy Landscapes from Molecular Dynamics Trajectories

Volkhardt, Andreas, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 42 KB

english, 2019

26

Computing Spatially Resolved Rotational Hydration-Shell Entropies from MD Simulations using an Orientational K-Nearest-Neighbor Density Estimator

Heinz, Leonard P., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 36 KB

2020

27

Local Dynamics of FRET Dyes in an Intrinsically Disordered Protein Studied by MD Simulations

Klement, Reinhard, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 40 KB

english, 2014

28

ChemInform Abstract: HYDROGENOLYSIS OF UNSTRAINED CARBON-CARBON SINGLE BONDS. DEALKYLATION OF CAGE HYDROCARBONS

GRUBMUELLER, P., SCHLEYER, P. VON R., MCKERVEY, M. A.

Journal:

Chemischer Informationsdienst

Year:

1979

File:

PDF, 111 KB

1979

29

Determining Free Energy Differences Through Non-Linear Morphing

Reinhardt, Martin, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 43 KB

english, 2019

30

ChemInform Abstract: ORIENTATION EFFECTS IN REACTIONS OF ALLENYL CATIONS WITH STYRENE

MAYR, H., GRUBMUELLER, B., HALBERSTADT, I. K.

Journal:

Chemischer Informationsdienst

Year:

1979

File:

PDF, 131 KB

1979

31

Structural Dynamics of Monomeric α-Synuclein on the PS-µS Time Scale Derived from MD Simulations

Klement, Reinhard, Graen, Timo, Grupi, Asaf, Haas, Elisha, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 40 KB

english, 2018

32

Probing the Accuracy of Explicit Solvent Constant pH Molecular Dynamics Simulations for Peptides

Dobrev, Plamen N., Vemulapalli, Sahithya, Nath, Nilamoni, Griesinger, Christian, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 42 KB

2020

33

Transient Structure Formation Kinetics of Monomeric Alpha-Synuclein Derived from MD Simulations

Klement, Reinhard, Graen, Timo, Grupi, Asaf, Haas, Elisha, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

Language:

english

File:

PDF, 41 KB

english, 2020

34

Automated cryo-EM Structure Refinement using Correlation-Driven Molecular Dynamics

Vaiana, Andrea C., Igaev, Maxim, Bock, Lars V., Kutzner, Carsten, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 63 KB

2020

35

Kinetics and Thermodynamics of â1 Ribosomal Frameshifting

Bock, Lars V., Caliskan, Neva, Peng, Bee-Zen, Korniy, Natalia, Belardinelli, Riccardo, Peske, Frank, Rodnina, Marina V., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 66 KB

2020

36

ChemInform Abstract: AN ADAMANTANE REARRANGEMENT. A NEW PATH

SCHLEYER, P. VON R., GRUBMUELLER, P., MAIER, W. F., VOSTROWSKY, O.

Journal:

Chemischer Informationsdienst

Year:

1980

File:

PDF, 200 KB

1980

37

Nonequilibrium dynamics in biomolecules

G. Stock, J. Wachtveitl, H. Grubmueller

Journal:

Chemical Physics

Year:

2006

Language:

english

File:

PDF, 43 KB

english, 2006

38

Bayesian Orientation Estimate and Structure Reconstruction from Sparse Single Molecule X-Ray Scattering Images

Walczak, Michal, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 37 KB

english, 2012

39

Primary Electronic Response In Biomolecules Exposed To X-ray Laser Radiation

Burmeister, Carl, Grubmueller, Helmut, Groenhof, Gerrit

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 34 KB

english, 2009

40

Rotation Triggers Nucleotide-Independent Conformational Transition of the Empty Beta Subunit of F1-ATPase

Czub, Jacek, Wieczor, Milosz, Tobiszewski, Adrian, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 46 KB

english, 2014

41

Fully Automated Correlation-Based Refinement of Atomic Models into High Resolution Cryo-EM Density Maps

Vaiana, Andrea C., Igaev, Maxim, Kutzner, Carsten, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 42 KB

english, 2018

42

Force Field Error Diagnosis and Structure-Driven Correction for the ATP-Magnesium Complex

Buelens, Floris, de Groot, Bert L., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 35 KB

2020

43

tRNA Dissociation from EF-Tu After GTP Hydrolisis - Primary Steps and Antibiotic Inhibition

Warias, Malte, Grubmueller, Helmut, Bock, Lars V.

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 44 KB

2020

44

Keep it Flexible: Driving Macromolecular Rotary Motions in Atomistic Simulations with Gromacs

Kutzner, Carsten, Czub, Jacek, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 36 KB

english, 2012

45

[IET 6th IET International Conference on Power Electronics, Machines and Drives (PEMD 2012) - Bristol, UK (27-29 March 2012)] 6th IET International Conference on Power Electronics, Machines and Drives (PEMD 2012) - A new electronic flight guarding system for light- and sport-aircraft

Grubmueller, E., Koglbauer, I., Braunstingl, R., Fruehwirth, K.

Year:

2012

File:

PDF, 251 KB

2012

46

A Helical Transport Mechanism for Type III Secretion

Gupta, Rashmi, Bubnis, Gregory, Goosmann, Christian, Lange, Adam, Grubmueller, Helmut, Kolbe, Michael

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 43 KB

english, 2015

47

IS THE BIOPSY GLEASON SCORE RELIABLY PREDICTIVE FOR THE GLEASON SCORE OF THE WHOLE PROSTATE?

M. Sonnleithner, T. Gruendler, F. Stoiber, W. Loidl, E. Sommerer, H. Meixl, K. Jeschke, G. Galle, J. Mauermann, K. Scheiber, K. Grubmueller, O. Kheyfts, F. Wimpissinger, G. Huber, P. Schmidt, A. Buche

Journal:

European Urology Supplements

Year:

2008

Language:

english

File:

PDF, 71 KB

english, 2008

48

Ions in Action - Studying Ion Channels by Computational Electrophysiology in GROMACS

Kutzner, Carsten, Ullmann, R. Thomas, de Groot, Bert L., Zachariae, Ulrich, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 43 KB

english, 2017

49

Thermodynamic Control of Ribosomal Frameshifting

Bock, Lars V., Caliskan, Neva, Korniy, Natalia, Peske, Frank, Rodnina, Marina V., Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 46 KB

english, 2019

50

Modulation of Intersubunit Interactions during tRNA Translocation through the Ribosome

Vaiana, Andrea C., Bock, Lars V., Blau, Christian, Schroeder, Gunnar F., Fischer, Niels, Stark, Holger, Rodnina, Marina, Grubmueller, Helmut

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 42 KB

english, 2013

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